2007 |
2006 | 2005 |2004
|2003 | 2002 | 2001
| 2000 | 1999 | 1998
| 1997 | 1996 | 1995
2008
Brettingham-Moore, K.H., Sprod, O.R., Chen, X, Oakford,
P, Shannon, M.F. and Holloway, A.F, Determinants of
a transcriptionally competent environment at the GM-CSF promoter. Nucleic
Acids Res. 2008 May;36(8):2639-53.
2007
Bunting, K, Rao, S, Hardy, K, Woltring, D, Denyer, GS,
Wang, J, Gerondakis, S and Shannon, M.F., Genome-wide
analysis of gene expression in T cells to identify targets of the NF-kB
transcription factor c-Rel. J Immunol 2007 Jun 1;178(11):7097-109.
Shannon, M.F., Genomic aspects of host response. In
Handbook of Genomic Medicine (Eds; Willard H and Ginsburg, G) Elsevier.
In press. Jan 2007.
2006
Bunting, K., Wang, J., and Shannon, M.F.,
2006, Control of interleukin-2 gene transcription: a paradigm for inducible,
tissue-specific gene expression.In Vitamins and Hormones, Interleukins,
(eds. G. Litwack.) 74: Elsevier Academic Press INC. pp. 105-145.
Shannon, M.F., Chen, X., Brettingham-Moore,
K., and Holloway, A., 2006, Chromatin Remodelling: Distinct Molecular
Events During Differentiation and Activation of T Cells. Current Immunology
Reviews 2, 273-289.
Rao, S, Bunting, K, Sutcliffe, EL and Shannon,
M.F., (2006) Deciphering regulatory networks controlled by
the NF-kB transcription factor c-Rel in T cells. In Microarrays and
Transcription Networks, 75-89 (Eds: MF Shannon and S Rao) Landes Bioscience.
Books
Transcriptional Regulatory Networks and Microarrays. Eds
MF Shannon and S Rao. (2006) Molecular Biology Intelligence
Unit, Landes Bioscience. ISBN 1-58706-290-9.
2005
Brettingham-Moore, K.H., Rao, S., Juelich, T., Shannon,
M.F., and Holloway, A.F., (2005), GM-CSF promoter chromatin
remodelling and gene transcription display distinct signal and transcription
factor requirements. Nucleic Acids Research 33(1), 225-34.
Chen, X., Wang, J., Woltring, D., Gerondakis, S., and
Shannon, M.F., 2005, Histone Dynamics on the Interleukin-2
Gene in Response to T-Cell Activation. Molecular and Cellular Biology
25(8), 3209-3219.
Shannon, M.F., McKenzie, K.U.S., Edgley,
A., Rao, S., Peng, K., Shweta, A., Schyvens, C.G., Anderson, W.P., Wilson,
S.R., Pittelkow, Y.E., Ohms, S., and Whitworth, J.A.,( 2005), Optimizing
microarray in experimental hypertension. Kidney International 67(1),
364-370.
Wang, J., Shannon, M.F., and Young, I.G., 2005, A role
for Ets1, synergizing with AP-1 and GATA-3 in the regulation of IL-5
transcription in mouse Th-2 lymphocytes. International immunology 18(20),
313-323.
2004
Grumont, R., Lock, P., Mollinari, M., Shannon,
M.F., Moore, A., and Gerondakis, S., (2004) The mitogen-induced
increase in T cell size involves PKC and NFAT activation of Rel/NF-kappa
B-dependent c-myc expression. Immunity 21(1), 19-30.
2003
Shannon, MF. (2003). A nuclear address with influence.
Nature Genetics 34 (1): 4-6.
Rao S, Gerondakis S, Woltring D and Shannon MF
(2003). c-Rel is required for chromatin remodeling across the IL-2
gene promoter. Journal of Immunology 170, 3724-3731
Holloway AF, Rao S, Chen X and
Shannon MF (2003). Changes in chromatin accessibility across the
GM-CSF promoter upon T cell activation are dependent on nuclear factor
kB proteins. J Exp Med 197, 413-423.
2002
Attema JL, Reeves R, Murray V, Levichkin I, Temple MD,
Tremethick DJ, Shannon MF (2002). The human IL-2 gene promoter
can assemble a positioned nucleosome that becomes remodeled upon T
cell activation. J Immunol 169, 2466-2476.
Shannon Frances M, Rao Sudha.(2002). Of Chips
and ChIPs ( Perspectives: Transcription). Science 296, 666-668
2001
Cakouros D, Cockerill PN, Bert AG, Mital R, Roberts
DC and Shannon MF (2001) An NF-kB/Sp1 region is essential for
chromatin remodeling and correct transcription of a human granulocyte
macrophage-colony stimulating factor transgene. J Immunol. 167, 302-310
Diamond P, Shannon MF, Vadas MF and Coles LS.
(2001) Cold shock domain factors activate the granulocyte-macrophage-colony
stimulating factor promoter in stimulate jurkat T cells. J. Biol.
Chem, 276: 7943-7951.
Holloway AF, Rao S, Shannon MF (2001) Regulation
of cytokine gene transcription in the immune system. Mol Immunol 38,
567-80.
Rao S, Procko E, Shannon MF (2001) Chromatin
Remodeling, Measured by a Novel Real-Time Polymerase Chain Reaction
Assay, Across the Proximal Promoter Region of the IL-2 Gene. The Journal
of Immunology 167, 4494-4503.
Shannon MF, Himes SR and Reeves R (2001) The
role of architectural transcription factors in IL-2 dependent T cell
proliferation.in" Interleukin --2 (IL-2) transcription"
Landes Bioscience Series (Eds Umlauf S & Beverly B). pp.1-17.
Shannon MF, Coles, LS, Attema, J and Diamond,
P. (2001) The role of architectural transcription factors in cytokine
gene transcription. J Leuk. Biol. 69: 21-32.
Shannon MF and Holloway AF. (2001) Chromatin
remodeling and transcriptional regulation of cytokine gene expression
in T cells. In "Contemporary clinical neuroscience; Cytokines and
Autoimmunity", (Eds: VK Kuchroo et al) Humana Press. pp. 416
2000
Coles LS, Diamond P, Occhiodoro F, Vadas MA, Shannon
MF. (2000) An ordered array of cold shock domain repressor elements
across tumor necrosis factor-responsive elements of the granulocyte-macrophage
colony-stimulating factor promoter. J Biol Chem 275:14482-93.
Himes SR, Reeves R, Attema J, Nissen M, Li Y, Shannon
MF. (2000) The role of high-mobility group I(Y) proteins in expression
of IL-2 and T cell proliferation. J Immunol.164, 3157-68.
Himes SR, Shannon MF. (2000) Assays for transcriptional
activity based on the luciferase reporter gene. Methods Mol Biol.
130, 165-74.
Holloway AF, Occhiodoro F, Mittler G, Meisterernst
M, Shannon MF. (2000) Functional interaction between the HIV
transactivator Tat and the transcriptional coactivator PC4 in T cells.
J Biol Chem 275, 668-77.
Kochetkova M,
Shannon MF. (2000) Triplex-forming
oligonucleotides and their use in the analysis of gene transcription.
Methods Mol Biol 130, 189-201.
1999
Himes, SR and Shannon, MF (1999) Essays for
transcriptional activity based on the luciferase reporter gene. In
Methods in Molecular Biology. Transcription Factor Protocols (Ed Tymers
MJ) 14, 165-174.
Kochetkova, M and Shannon, MF (1999) DNA triplex
as a tool to regulate cytokine gene expression. In Triplex L forming
Oligonucleotides (Eds Malvey C, Harel-Bellan A and Pritchard LL) pp159-166.
Kochetkova, M and
Shannon, MF (1999) Triplex
forming oligonucleotides and their use in analysis of gene transcription.
In Methods in Molecular Biology. Transcription Factor Protocols, ed
Tymers MJ 16, 189-201.
Shang C, Attema J, Cakouros, D, Cockerill PN and
Shannon MF
(1999) Nuclear Factor of Activated T cells contributes to thefunction
of the CD28 response region of the GM-CSF promoter. International
Immunology, 11:1945-1956.
1998
Shannon, MF, Himes, SR and Attema, J. (1998)
A role for the architectural transcription factors HMGI(Y) in cytokine
gene transcription in T cells. Immunol and Cell Biol. 76:461-466.
Kochetkova M and Shannon MF. (1998) DNA Triplex
formation on the GM-CSF Gene proximal promoter. Nucleosides and Nucleotides
17:9-11.
Catron KM, Brickwood, JR, Shang C, Li Y, Shannon
MF and Parks TP. (1998) Cooperative binding and synergistic activation
by RelA and C/EBPb on the ICAM-1 promoter. Cell Growth and Differentation.
9:949-959.
Kochetkova M and Shannon MF. (1998) DNA triplex
formation on the granulocyte-macrophage colony-stimulating factor
gene proximal promoter Nucleos Nucleot 17, 1801-1807
Himes SR and Shannon MF. (1998) Assays
for transcriptional activity based on the luciferase reporter gene.
Methods in Molecular Biology. in press.
Kochetkova M and Shannon MF. (1998) Triplex
forming oligonucleotides and their use in analysis of gene transcription.
Triple Helix forming oligonucliotides, 12, 159-166.
Holloway AF, Occhiodoro F and
Shannon MF. Functional
and physical interaction of HIV Tat and the transcriptional coactivator
PC4. Submitted.
1997
Shannon MF, Cockerill PN and Coles LS. (1997)
Signals for activation of the GM-CSF promoter and enhancer in T cells.
Critical Reviews in Immunology 18:301-324.
Kochetkova M, Iversen P, Lopez AF and
Shannon MF.
(1997) Inhibition of Juvenile chronic myeloid leukemic cell growth
by triplex inhibition of GM-CSF transcription. J Clin Invest
99:3000-3008 .
1996
Himes SR, Katsikeros R and Shannon, M.F.
(1996) Costimulation of cytokine gene expression in T cells
by the human T leukemia/lymphotropic virus type 1 trans activator
Tax. J. Virol. 70:4001-4008.
Kochetkova, M. and Shannon, M.F. (1996)
DNA triplex formation selectively inhibits GM-CSF gene expression
in human T cells. J. Biol. Chem. 271:14438-14444.
Coles, LS, Diamond, P, Occhiodoro, F, Vadas, MA and
Shannon, MF. (1996) Cold Shock Domain proteins
repress transcription from the GM-CSF promoter. Nucleic Acids
Research 24:2311-2318.
Himes SR, Coles LS, Reeves R and Shannon MF. (1996)
High-mobility-group protein I(Y) is required for function and for
c-Rel but not Rel A binding to CD28 response elements within the GM-CSF
and IL-2 promoters. Immunity 5:479-489.
Thomas RS, Tymms MJ, McKinlay, LH,
Shannon MF,
Seth A and Kola I (1996) Ets1,NF-kB and AP-1 synergistically transactivate
the human GM-CSF promoter. Oncogene 14:2845-2855.
1995
Cockerill PN, Bert AG, Jenkins F, Ryan GR, Shannon
MF and Vadas MA. (1995) Human granulocyte-macrophage
colony-stimulating factor enhancer function is associated with cooperative
interactions between AP-1 and NFATp/c. Mol & Cell Biol 15:2071-2079.
Shannon MF, Himes SR and Coles LS. (1995)
GM-CSF and IL-2 share common control mechanisms in response to costimulatory
signals in T cells. J Leuk Biol 57:1-7.
Bagley CJ, Woodcock JM, Hercus TR, Shannon MF
and Lopez AF. (1995) Interaction of GM-CSF and IL-3 with
the common b-chain of their receptors. J Leuk Biol 57:739-746.
Jenkins F, Cockerill PN, Bohmann D and Shannon
MF. (1995) Multiple signals are required for function
of the human granulocyte-macrophage colony-stimulating factor gene
promoter in T cells. J Immunol 155:1240-1251.
Thomas, R.S., Tymms, M.J., Seth, A., Shannon, M.F. and Kola,
I. (1995) ETS1 transactivates the human GM-CSF promoter
in Jurkat T cells stimulated with PMA and ionomycin. Oncogene
11:2135-2143.
