Computational Genomics Collaborators
Local:
Prof. Frances Shannon (JCSMR/ANU), Dr. Adam Kowalczyk (NICTA). Discovering the
lexicon of gene regulation.
Prof. Simon Easteal (JCSMR/ANU). Predicting phenotypic significance of genetic
variation, and evolution of BRCA1 in ancestral mammals.
Dr. Alex Isaev (MSI/ANU). Inferring the identity of sequence residues that interact,
and evolution of BRCA1 in ancestral mammals.
Prof. Chris Goodnow (JCSMR/ANU), Dr. Carola Vinuesa (JCSMR/ANU), Dr. Matt Cooke
(Canberra Hospital/ANU). The genetic basis of Lupus.
National and International:
Dr Von Bing Yap (National University of Singapore), Statistical inference from
comparative genomic data.
Dr. James Cai (Stanford University). Discovery of the properties of DNA management
through studies on full fungal genome.
Dr. Rob Knight (University of Colorado, Boulder). Software for genomic data
analysis.
Dr Matthew Wakefield (Walter and Eliza Hall Institute). Adaptive modifications
to BRCA1 in ancestral mammals.
Dr Wes Warren (Washington University). Genome sequence of the platypus.
Current funding and Support
ARC Linkage (with Cray Australia Pty. Ltd.)
& Discovery, NHMRC.
Computing time allocation on the Australian Partnership for Advanced Computing
(APAC) national facility.
A software development tool from Wingware.
A few of the key open source projects that we benefit from: Linux,
Python, jEdit,
and SubEthaEdit.
